Sep 27 2022
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AlphaFold
an implementation of the inference pipeline of AlphaFold v2.0 using a completely new model that was entered in CASP14.
Updated versions:
2.2.4 | Linux 64
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Sep 27 2022
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lorax
A long-read analysis toolbox for cancer genomics.
Updated versions:
0.3.5 | OS X INTEL
0.3.5 | Linux 64
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Sep 23 2022
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BCFtools
a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.
Updated versions:
1.16 | Linux 64
1.16 | OS X INTEL
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Sep 22 2022
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SeqKit
a cross-platform ultrafast comprehensive toolkit for FASTA/Q processing.
Updated versions:
2.3.1 | Linux 64
2.3.1 | OS X INTEL
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Sep 21 2022
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smoove
structural variant calling and genotyping with existing tools, but, smoothly.
Updated versions:
0.2.8 | Linux 64
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Sep 21 2022
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RoseTTAFold
Accurate prediction of protein structures and interactions using a 3-track network
Updated versions:
1.1.0 | Linux 64
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Sep 07 2022
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SAMtools
(Sequence Alignment/Map) a generic format for storing large nucleotide sequence alignments that provides various utilities for manipulating alignments, including sorting, merging, indexing and generating alignments in a per-position format.
Updated versions:
1.16.1 | Linux 64
1.16.1 | OS X INTEL
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Sep 07 2022
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poretools
a toolkit for working with nanopore sequencing data from Oxford Nanopore
Updated versions:
0.6.1a1 | Linux 64
0.6.1a1 | OS X INTEL
|
Sep 02 2022
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AlphaFold
an implementation of the inference pipeline of AlphaFold v2.0 using a completely new model that was entered in CASP14.
Updated versions:
2.2.0 | Linux 64
2.1.2 | Linux 64
2.2.3 | Linux 64
|
Sep 02 2022
|
MDAnalysis
an object-oriented Python library to analyze trajectories from molecular dynamics (MD) simulations in many popular formats. It can write most of these formats, too, together with atom selections suitable for visualization or native analysis tools.
Updated versions:
2.2.0 | Linux 64
2.1.0 | Linux 64
2.2.0 | OS X INTEL
2.1.0 | OS X INTEL
|
Sep 02 2022
|
AlphaFold
an implementation of the inference pipeline of AlphaFold v2.0 using a completely new model that was entered in CASP14.
Updated versions:
2.2.2 | Linux 64
|
Sep 02 2022
|
FreeSurfer
a software package for the analysis and visualization of structural and functional neuroimaging data from cross-sectional or longitudinal studies.
Updated versions:
7.3.2 | OS X INTEL
7.3.2 | Linux 64
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