Jul 27 2023
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MUSCLE
(multiple sequence comparison by log-expectation) a public domain multiple alignment software for protein and nucleotide sequences.
Updated versions:
5.1 | Linux 64
5.0.1428 | Linux 64
5.1 | OS X INTEL
5.0.1428 | OS X INTEL
|
Jul 19 2023
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tigmint
Correct misassemblies using linked or long reads
Updated versions:
1.2.10 | Linux 64
1.2.10 | OS X INTEL
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Jul 18 2023
|
GoldRush
memory-efficient de novo assembly of long reads
Updated versions:
1.0.3 | Linux 64
1.0.3 | OS X INTEL
|
Jul 17 2023
|
dammit
simple de novo transcriptome annotator
Updated versions:
1.2 | OS X INTEL
1.2 | Linux 64
|
Jul 17 2023
|
Python
a general-purpose, interpreted, object oriented, high-level dynamic programming language that emphasizes code readability. Its syntax allows programmers to express concepts in fewer lines of code than in C++ or Java, thus allowing programmers to work more quickly and integrate their systems more effectively.
Updated versions:
2.7.2 | Linux 64
|
Jul 14 2023
|
MashMap
A fast approximate aligner for long DNA sequences.
Updated versions:
3.0.1 | OS X INTEL
3.0.5 | Linux 64
|
Jul 13 2023
|
Qt
a cross-platform application framework that is used for developing application software that can be run on various software and hardware platforms with little or no change in the underlying codebase, while still being a native application with native capabilities and speed.
Updated versions:
4.7.2 | Linux 64
|
Jul 13 2023
|
Kraken 2
a system for assigning taxonomic labels to short DNA sequences, usually obtained through metagenomic studies.
Updated versions:
2.1.3 | Linux 64
2.1.3 | OS X INTEL
|
Jul 11 2023
|
R-pkgs-Biogrids
contains common and requested R packages for BIOGRIDS. This title is dependent on R.
Updated versions:
r4.2.3-latest | Linux 64
r4.2.3-latest | OS X INTEL
r4.2.3-20230710 | OS X INTEL
r4.2.3-20230710 | Linux 64
|
Jul 10 2023
|
R
a free software environment for statistical computing and graphics.
Updated versions:
4.1 | OS X INTEL
|
Jul 07 2023
|
kallisto
a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment.
Updated versions:
0.50.0 | Linux 64
0.50.0 | OS X INTEL
|
Jul 06 2023
|
R-pkgs-Biogrids
contains common and requested R packages for BIOGRIDS. This title is dependent on R.
Updated versions:
r4.3.0-latest | Linux 64
|
Jul 05 2023
|
gappa
Genesis Applications for Phylogenetic Placement Analysis
Updated versions:
0.8.4 | OS X INTEL
0.8.4 | Linux 64
|
Jul 05 2023
|
R-pkgs-Biogrids
contains common and requested R packages for BIOGRIDS. This title is dependent on R.
Updated versions:
r4.3.0-20230702 | Linux 64
|
Jul 05 2023
|
R
a free software environment for statistical computing and graphics.
Updated versions:
4.3.0 | Linux 64
|
