Feb 23 2024
|
AlphaFold
an implementation of the inference pipeline of AlphaFold v2.0 using a completely new model that was entered in CASP14.
Updated versions:
2.3.2_202402b | Linux 64
|
Feb 15 2024
|
humann3
is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data (typically millions of short DNA/RNA reads).
Updated versions:
3.8 | OS X INTEL
3.8 | Linux 64
|
Feb 15 2024
|
MetaPhlAn
Metagenomic Phylogenetic Analysis
Updated versions:
4.0.6 | Linux 64
4.0.6 | OS X INTEL
|
Feb 14 2024
|
BLAST+
a suite of BLAST (Basic Local Alignment Search Tool) tools that utilizes the NCBI C++ Toolkit with a number of performance and feature improvements over the legacy BLAST applications.
Updated versions:
2.15.0 | Linux 64
|
Feb 08 2024
|
mbgc
(Multiple Bacteria Genome Compressor) is a tool for compressing genomes in FASTA (or gzipped FASTA) input format.
Updated versions:
2.0.1 | Linux 64
2.0.1 | OS X INTEL
|
Feb 06 2024
|
LAST
finds & aligns related regions of sequences. LAST is designed for moderately large data (e.g. genomes, DNA reads, proteomes).
Updated versions:
1541 | Linux 64
1541 | OS X INTEL
|
Feb 01 2024
|
HHsuite
an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).
Updated versions:
3.3.0 | OS X INTEL
3.3.0 | Linux 64
|
Feb 01 2024
|
hictk
Blazing fast toolkit to work with .hic and .cool files
Updated versions:
0.0.7 | Linux 64
0.0.7 | OS X INTEL
|