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  • BioGrids: an initiative to provide centralized, cross-disciplinary scientific software support, based on the SBGrid model. Read more in eLIFE.

  • A segmented purkinje cell (turquoise) extends collaterals, forming synapses (gold/red) in the cerebellum, from the HMS Image and Data Analysis Core. Learn more.

  • HMS's Drosophila RNAi Screening Center (DRSC) is building a comprehensive Drosophila insulin signaling network (InsulinNet).

Recent Software Updates

Feb 15 | MetaPhlAn

Metagenomic Phylogenetic Analysis >>

Feb 15 | humann3

is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagen… >>

Feb 08 | mbgc

(Multiple Bacteria Genome Compressor) is a tool for compressing genomes in FASTA (or gzipped FASTA) input format. >>

Feb 06 | LAST

finds & aligns related regions of sequences. LAST is designed for moderately large data (e.g. genomes, DNA reads, proteomes). >>

Feb 06 | Juicer

a one-click pipeline for processing terabase scale Hi-C datasets. Using Juicer, you can: Go from raw fastq files to Hi-C maps binned at … >>

Feb 01 | hictk

Blazing fast toolkit to work with .hic and .cool files >>

Jan 29 | SAMtools

(Sequence Alignment/Map) a generic format for storing large nucleotide sequence alignments that provides various utilities for manipulating… >>

Latest news

SBGrid/Harvard Shield

BioGrids Technology Breakfasts

Join us once monthly for our BioGrids Technology Breakfast. Fridays at 9:30am on Zoom, we'll hear about research computing tools and services available to the Harvard community, get updates from …

BioGrids for SBGrid Users Tutorial

For SBGrid users who are already familiar with the SBGrid software installation platform, members may opt-in in to include the BioGrids software stack in their installation. BioGrids in an SBGrid-style …

SBGrid/Harvard Shield

Training Opportunities at HMS

A range of bioinformatics training opportunities are available to HMS researchers, with classes ranging from 2-hour introductory Python lectures to a 10-day in-depth NSG data analysis courses. Check out the …

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