• BioGrids: an initiative to provide centralized, cross-disciplinary scientific software support, based on the SBGrid model. Read more in eLIFE.

  • A segmented purkinje cell (turquoise) extends collaterals, forming synapses (gold/red) in the cerebellum, from the HMS Image and Data Analysis Core. Learn more.

  • HMS's Drosophila RNAi Screening Center (DRSC) is building a comprehensive Drosophila insulin signaling network (InsulinNet).

Recent Software Updates

Jan 14 | PyRQA

a tool to conduct recurrence analysis in a massively parallel manner using the OpenCL framework. >>

Jan 13 | DosageConvertor

DosageConvertor is a C++ tool to convert dosage files (in VCF format) from Minimac3/4 to other formats such as MaCH or PLINK. >>

Jan 13 | CellRanger

Cell Ranger is a set of analysis pipelines that process Chromium single-cell RNA-seq output to align reads, generate feature-barcode matric… >>

Jan 12 | NanoPack

A set of tools developed for visualization and processing of long-read sequencing data from Oxford Nanopore Technologies and Pacific Biosci… >>

Jan 11 | sniffles

Sniffles is a structural variation caller using third generation sequencing. >>

Jan 05 | R

a free software environment for statistical computing and graphics. >>

Dec 11 | hic_breakfinder

A framework that integrates optical mapping, high-throughput chromosome conformation capture (Hi-C), and whole genome sequencing to systema… >>

Latest news

SBGrid/Harvard Shield

BioGrids Technology Breakfasts

Join us once monthly for our BioGrids Technology Breakfast where we'll hear about research computing tools and services available to the Harvard community and get updates from a variety of …

SBGrid/Harvard Shield

Training Opportunities at HMS

A range of bioinformatics training opportunities are available to HMS researchers, with classes ranging from 2-hour introductory Python lectures to a 10-day in-depth NSG data analysis courses. Check out the …