SBGrid Consortium homepage

an object-oriented Python library to analyze trajectories from molecular dynamics (MD) simulations in many popular formats. It can write most of these formats, too, together with atom selections suitable for visualization or native analysis tools.

Cas-OFFinder is OpenCL based, ultrafast and versatile program that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases (RGEN).

a suite of BLAST (Basic Local Alignment Search Tool) tools that utilizes the NCBI C++ Toolkit with a number of performance and feature improvements over the legacy BLAST applications.

(SAM) produces high quality object masks from input prompts such as points or boxes, and it can be used to generate masks for all objects in an image.

a tool that enables quick import and visualisation of structural biology data inside of Blender.

An analysis toolkit for single-cell RNA-seq.

a command line program to manage files on cloud storage.

Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)

MHC I ligand prediction package with competitive accuracy and a fast and documented implementation.

a tool for symphonizing pileup and full-alignment for high-performance long-read variant calling