Supported Applications
HHsuite
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Description
an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install hhsuite
Available operating systems: Linux 64, OS X INTEL -
Primary Citation*
M. Remmert, A. Biegert, A. Hauser, and J. Söding. 2012. HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nature Methods. 9: 173-175.
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*Full citation information available through
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Citation Note
Please cite the following url: https://github.com/soedinglab/hh-suite
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Keywords
High-throughput sequencing, Protein-protein sequence alignment, Proteomics
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Default Versions
Linux 64:  3.0.3 (53.9 MB)
OS X INTEL:  3.0.3 (28.6 MB) -
Other Versions
Linux 64:
3.0.0 (112.9 MB) -
OS X INTEL:
3.0.0 (27.4 MB)
Developers
Johannes Soeding, Martin Steinegger