Dec 14 2023
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scCODA
scCODA is a toolbox for statistical models to analyze changes in compositional data, especially from single-cell RNA-seq experiments.
Updated versions:
0.1.9 | OS X INTEL
0.1.9 | Linux 64
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Dec 14 2023
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Clair3
a tool for symphonizing pileup and full-alignment for high-performance long-read variant calling
Updated versions:
1.0.4 | Linux 64
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Dec 14 2023
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Sniffles
a structural variation caller using third generation sequencing.
Updated versions:
1.0.12b | OS X INTEL
2.2 | OS X INTEL
2.2 | Linux 64
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Dec 05 2023
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VerifyBamID2
A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
Updated versions:
2.0.1 | OS X INTEL
2.0.1 | Linux 64
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Dec 05 2023
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scVelo
is a scalable toolkit for RNA velocity analysis in single cells.
Updated versions:
0.2.5 | Linux 64
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Dec 04 2023
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R
a free software environment for statistical computing and graphics.
Updated versions:
4.2.1 | OS X INTEL
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Dec 01 2023
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BCFtools
a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.
Updated versions:
1.17 | OS X INTEL
1.17 | Linux 64
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