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scCODA

  • Description

    scCODA is a toolbox for statistical models to analyze changes in compositional data, especially from single-cell RNA-seq experiments.

  • Usage

    To list all executables provided by scCODA, run: $ biogrids-list sccoda Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install sccoda Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    M. Büttner, J. Ostner, C. L. Müller, F. J. Theis, and B. Schubert. 2021. scCODA is a Bayesian model for compositional single-cell data analysis. Nature communications. 12(1): 6876.


    • *Full citation information available through

  • Keywords

    scRNA-Seq Analysis

  • Default Versions

    Linux 64:  0.1.9 (3.3 GB)
    OS X INTEL:  0.1.9 (2.8 GB)

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