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Supported Applications

MashMap

  • Description

    A fast approximate aligner for long DNA sequences.

  • Usage

    To list all executables provided by MashMap, run: $ biogrids-list mashmap Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install mashmap Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    B. Kille, E. Garrison, T. J. Treangen, and A. M. Phillippy. 2023. Minmers are a generalization of minimizers that enable unbiased local Jaccard estimation. bioRxiv : the preprint server for biology.


    • *Full citation information available through

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