Software Updates

metaMDBG

MetaMDBG is a fast, low-memory assembler designed for long and accurate metagenomic reads, such as those produced by PacBio HiFi and Nanopore sequencing.

MDAnalysis

an object-oriented Python library to analyze trajectories from molecular dynamics (MD) simulations in many popular formats. It can write most of these formats, too, together with atom selections suitable for visualization or native analysis tools.

tensorQTL

tensorQTL is a GPU-enabled QTL mapper, achieving ~200-300 fold faster cis- and trans-QTL mapping compared to CPU-based implementations.

R

a free software environment for statistical computing and graphics.