Software Updates

jq

a lightweight and flexible command-line JSON processor.

scvi-tools

(single-cell variational inference tools) is a package for end-to-end analysis of single-cell omics data.

TractSeg

tool for fast and accurate white matter bundle segmentation from Diffusion MRI. It can create bundle segmentations, segmentations of the endregions of bundles and Tract Orientation Maps (TOMs). Moreover, it can do tracking on the TOMs creating bundle-specific tractogram and do Tractometry analysis on those.

H2O

a scalable machine learning and predictive analytics platform.