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Supported Applications

xPore

  • Description

    is a Python package for identification and quantification of differential RNA modifications from direct RNA sequencing

  • Usage

    To list all executables provided by xPore, run: $ biogrids-list xpore Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install xpore Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    P. N. Pratanwanich, F. Yao, Y. Chen, C. W. Q. Koh, Y. K. Wan, C. Hendra, P. Poon, Y. T. Goh, P. M. L. Yap, J. Y. Chooi, W. J. Chng, S. B. Ng, A. Thiery, W. S. S. Goh, and J. Göke. 2021. Identification of differential RNA modifications from nanopore direct RNA sequencing with xPore. Nature biotechnology. 39(11): 1394-1402.


    • *Full citation information available through

  • Keywords

    RNA-Sequencing

  • Default Versions

    Linux 64:  2.1 (521.2 MB)
    OS X INTEL:  2.1 (425.4 MB)

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