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Supported Applications

TrimGalore

  • Description

    a wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data.

  • Usage

    To list all executables provided by TrimGalore, run: $ biogrids-list trimgalore Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install trimgalore Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    Z. Wu, X. Wang, and X. Zhang. 2011. Using non-uniform read distribution models to improve isoform expression inference in RNA-Seq. Bioinformatics. 27(4): 502-508.


    • *Full citation information available through

  • Keywords

    High-throughput sequencing

  • Default Versions

    Linux 64:  0.6.6 (26.0 MB)
    OS X INTEL:  0.6.6 (26.0 MB)

  • Other Versions

      Linux 64:

      0.5.0 (23.9 MB)

    • OS X INTEL:

      0.5.0 (23.9 MB)

  • Developers

    Felix Krueger

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