Supported Applications


  • Description

    a command-line toolkit for rapid manipulation of NCBI taxonomy data.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install taxonkit Copy to clipboard
  • Primary Citation*

    W. Shen and H. Ren. 2021. TaxonKit: A practical and efficient NCBI taxonomy toolkit. Journal of Genetics and Genomics.

    • *Full citation information available through

  • Keywords


  • Default Versions

    Linux 64:  0.8.0
    OS X INTEL:  0.8.0

  • Other Versions

      Linux 64:

      0.5.0, 0.3.0
    • OS X INTEL:

      0.5.0, 0.3.0