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Supported Applications

SMALT

  • Description

    SMALT aligns DNA sequencing reads with a reference genome.

    Reads from a wide range of sequencing platforms can be processed, for example Illumina, Roche-454, Ion Torrent, PacBio or ABI-Sanger. Paired reads are supported. There is no support for SOLiD reads.

  • Usage

    To list all executables provided by SMALT, run: $ biogrids-list smalt Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install smalt Copy to clipboard Available operating systems: Linux 64, OS X INTEL
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