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skewer

  • Description

    implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming. It is specially designed for processing next-generation sequencing (NGS) paired-end sequences.

  • Usage

    To list all executables provided by skewer, run: $ biogrids-list skewer Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install skewer Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    H. Jiang, R. Lei, S.-W. Ding, and S. Zhu. 2014. Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads. BMC Bioinformatics. 15(182).


    • *Full citation information available through

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