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Scallop-LR

  • Description

    reference-based transcriptome assembler for long-reads RNA-seq data

  • Usage

    To list all executables provided by Scallop-LR, run: $ biogrids-list scallop-lr Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install scallop-lr Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    L. H. Tung, M. Shao, and C. Kingsford. 2019. Quantifying the benefit offered by transcript assembly with Scallop-LR on single-molecule long reads. Genome biology. 20(1): 287.


    • *Full citation information available through

  • Keywords

    Genome Assembly

  • Default Versions

    Linux 64:  0.9.2 (227.8 MB)
    OS X INTEL:  0.9.2 (214.9 MB)

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