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Supported Applications

RoseTTAFold-All-Atom

  • Description

    RoseTTAFold All-Atom is a biomolecular structure prediction neural network that can predict a broad range of biomolecular assemblies.

  • Usage

    To list all executables provided by RoseTTAFold-All-Atom, run: $ biogrids-list rosettafoldaa Copy to clipboard
  • Usage Notes

    RosettaFold-All-Atom (RFAA) in SBGrid/BioGrids does not include SignalP. It is not needed to run inferences.

    RFAA provides the following callable programs in the SBGrid environment:

    python.rfaa

    We provide an example of how to run RFAA in SBGrid here:

    https://sbgrid.org/wiki/examples/rosettafold_all_atom

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install rosettafoldaa Copy to clipboard Available operating systems: Linux 64
  • Primary Citation*

    R. Krishna, J. Wang, W. Ahern, P. Sturmfels, P. Venkatesh, Kalvet I, G. R. Lee, F. S. Morey-Burrows, Anishchenko I, I. R. Humphreys, R. McHugh, D. Vafeados, X. Li, G. A. Sutherland, A. Hitchcock, C. N. Hunter, A. Kang, E. Brackenbrough, A. K. Bera, M. Baek, F. DiMaio, and D. Baker. 2024. Generalized biomolecular modeling and design with RoseTTAFold All-Atom. Science (New York, N.Y.). 384(6693): eadl2528.


    • *Full citation information available through

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