Supported Applications
Quartz
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Description
(QUAlity score Reduction at Terabyte scale) an efficient de novo quality score compression tool based on traversing the k-mer landscape of NGS read datasets.
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Usage
To list all executables provided by Quartz, run:$ biogrids-list quartz
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install quartz
Available operating systems: Linux 64, OS X INTEL -
Primary Citation*
Y. W. Yu, D. Yorukoglu, J. Peng, and B. Berger. 2015. Quality score compression improves genotyping accuracy. Nature Biotechnology. 33(3): 240-243.
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*Full citation information available through
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Keywords
DNA Sequence Data Compression, High-throughput sequencing, WGS Analysis
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Default Versions
Linux 64:  0.2.2 (226.4 KB)
OS X INTEL:  0.2.2 (180.1 KB) -
Developers
Yun William Yu, Bonnie Berger