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PyEnsembl

  • Description

    a Python interface to Ensembl reference genome metadata such as exons and transcripts. PyEnsembl downloads GTF and FASTA files from the Ensembl FTP server and loads them into a local database. PyEnsembl can also work with custom reference data specified using user-supplied GTF and FASTA files.

  • Usage

    To list all executables provided by PyEnsembl, run: $ biogrids-list pyensembl Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install pyensembl Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Citation Note

    Please cite the website: https://github.com/openvax/pyensembl

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