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prottest3

  • Description

    is a bioinformatic tool for the selection of best-fit models of aminoacid replacement for the data at hand. ProtTest makes this selection by finding the model in the candidate list with the smallest Akaike Information Criterion (AIC), Bayesian Information Criterion (BIC) score or Decision Theory Criterion (DT).

  • Usage

    To list all executables provided by prottest3, run: $ biogrids-list prottest3 Copy to clipboard

  • Usage Notes

    prottest3 provides the following executables:

    prottest3

    runProtTestHPC.sh

    runXProtTestHPC.sh

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install prottest3 Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    D. Darriba, G. L. Taboada, R. Doallo, and P. D.. 2011. ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics. 27(8): 1164-1165.


    • *Full citation information available through

  • Keywords

    Other

  • Default Versions

    Linux 64:  3.4.2 (10.3 MB)

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