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Supported Applications

ProSolo

  • Description

    is a variant caller for single cell data from whole genome amplification with multiple displacement amplification (MDA). It relies on a pair of samples, where one is from an MDA single cell and the other from a bulk sample of the same cell population, sequenced with any next-generation sequencing technology.

  • Usage

    To list all executables provided by ProSolo, run: $ biogrids-list prosolo Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install prosolo Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    L. J. Dijkstra, J. Köster, T. Marschall, and A. Schönhuth. 2017. Enhancing Sensitivity And Controlling False Discovery Rate In Somatic Indel Discovery Using A Latent Variable Model. bioRxiv.


    • *Full citation information available through

  • Keywords

    Variant Analysis

  • Default Versions

    Linux 64:  0.6.1 (85.8 MB)
    OS X INTEL:  0.6.1 (97.3 MB)

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