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Supported Applications

PlotHiC

  • Description

    PlotHiC is used to visualize whole genome-wide contact heatmaps after genome scaffolding

  • Usage

    To list all executables provided by PlotHiC, run: $ biogrids-list plothic Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install plothic Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    Z. Jiang, Z. Peng, Z. Wei, J. Sun, Y. Luo, L. Bie, G. Zhang, and Y. Wang. 2024. A deep learning-based method enables the automatic and accurate assembly of chromosome-level genomes. Nucleic acids research. 52(19): e92.


    • *Full citation information available through

  • Keywords

    Genome Assembly

  • Default Versions

    Linux 64:  0.5.0 (536.8 MB)
    OS X INTEL:  0.5.0 (461.0 MB)

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