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PhenoGPT2

  • Description

    an advanced phenotype recognition model, leveraging the robust capabilities of large language models. It is an improved version of PhenoGPT (Jingye et. al. 2023). It employs a fine-tuned implementation on the synthetic medical data generated by Llama 3.1 70B, MIMIC-IV deidentified clinical notes, and Human Phenotype Ontology Database, to enhance prediction accuracy and alignments.

  • Usage

    To list all executables provided by PhenoGPT2, run: $ biogrids-list phenogpt2 Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install phenogpt2 Copy to clipboard Available operating systems: Linux 64
  • Citation Note

    Nguyen, Quan Minh and Kai Wang. PhenoGPT2. 2025. https://github.com/WGLab/PhenoGPT2

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