Supported Applications


  • Description

    Phantompeakqualtools computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.

  • Primary Citation*

    L. S. e. al. 2012. ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia. Genome Res. 22(9): 1813-1831.

    • *Full citation information available through