Supported Applications

pbalign

Description

pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file will be compatible with Quiver if --forQuiver option is specified.
Usage
To list all executables provided by pbalign, run: $ biogrids-list pbalign
Installation
Use the following command to install this title with the CLI client: $ biogrids-cli install pbalign Available operating systems: Linux 64, OS X INTEL

Keywords

High-throughput sequencing, PacBio Sequencing
Default Versions

Linux 64: 0.4.1 (236.7 MB)
OS X INTEL: 0.4.1 (217.5 MB)