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PASTA

  • Description

    is an implementation of the PASTA (Practical Alignment using Saté and TrAnsitivity) algorithm.

  • Usage

    To list all executables provided by PASTA, run: $ biogrids-list pasta Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install pasta Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    S. Mirarab, N. Nguyen, S. Guo, L. S. Wang, J. Kim, and T. Warnow. 2015. PASTA: Ultra-Large Multiple Sequence Alignment for Nucleotide and Amino-Acid Sequences. Journal of computational biology : a journal of computational molecular cell biology. 22(5): 377-86.


    • *Full citation information available through

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