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OCOCO

  • Description

    the first program capable of inferring variants in a real-time, as read alignments are fed in. Ococo inputs unsorted alignments from a stream and infers single-nucleotide variants, together with a genomic consensus, using statistics stored in compact several-bit counters.

  • Usage

    To list all executables provided by OCOCO, run: $ biogrids-list ococo Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install ococo Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Citation Note

    Please cite: https://arxiv.org/abs/1712.01146

  • Keywords

    Variant Analysis

  • Default Versions

    Linux 64:  0.1.2.4 (14.1 MB)
    OS X INTEL:  0.1.2.4 (658.0 KB)

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