Supported Applications


  • Description

    the first program capable of inferring variants in a real-time, as read alignments are fed in. Ococo inputs unsorted alignments from a stream and infers single-nucleotide variants, together with a genomic consensus, using statistics stored in compact several-bit counters.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install ococo Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Citation Note

    Please cite:

  • Keywords

    Variant Analysis

  • Default Versions

    Linux 64: (14.1 MB)
    OS X INTEL: (657.9 KB)