the first program capable of inferring variants in a real-time, as read alignments are fed in. Ococo inputs unsorted alignments from a stream and infers single-nucleotide variants, together with a genomic consensus, using statistics stored in compact several-bit counters.
InstallationUse the following command to install this title with the CLI client:
$ biogrids-cli install ococo
Please cite: https://arxiv.org/abs/1712.01146