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oarfish

  • Description

    oarfish is a program for quantifying transcript-level expression from long-read (i.e. Oxford nanopore cDNA and direct RNA and PacBio) sequencing technologies.

  • Usage

    To list all executables provided by oarfish, run: $ biogrids-list oarfish Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install oarfish Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    Z. Z. Jousheghani and R. Patro. 2024. Oarfish: Enhanced probabilistic modeling leads to improved accuracy in long read transcriptome quantification. bioRxiv : the preprint server for biology.


    • *Full citation information available through

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