Supported Applications

NGMLR

  • Description

    (coNvex Gap-cost alignMents for Long Reads) a long-read mapper designed to sensitively align PacBilo or Oxford Nanopore to (large) reference genomes.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install ngmlr Copy to clipboard
  • Primary Citation*

    F. J. Sedlazeck, P. Rescheneder, M. Smolka, H. Fang, M. Nattestad, A. von Haeseler, and M. C. Schatz. 2018. Accurate detection of complex structural variations using single-molecule sequencing. Nat Methods. 15(6): 461-468.


    • *Full citation information available through

  • Keywords

    Nanopore

  • Default Versions

    Linux 64:  0.2.7
    OS X INTEL:  0.2.7

  • Other Versions

      Linux 64:

      0.2.5
    • OS X INTEL:

      0.2.5
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