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Supported Applications

mosdepth

  • Description

    fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing.

  • Usage

    To list all executables provided by mosdepth, run: $ biogrids-list mosdepth Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install mosdepth Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    B. S. Pedersen and A. R. Quinlan. 2018. Mosdepth: quick coverage calculation for genomes and exomes. Bioinformatics. 34(5): 867-868.


    • *Full citation information available through

  • Keywords

    High-throughput sequencing

  • Default Versions

    Linux 64:  0.3.8 (18.3 MB)
    OS X INTEL:  0.3.8 (42.7 MB)

  • Other Versions

      Linux 64:

      0.3.1 (80.4 MB)

    • OS X INTEL:

      0.3.1 (43.1 MB)
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