scan contig files against PubMLST typing schemes.
InstallationUse the following command to install this title with the CLI client:
$ biogrids-cli install mlst
The mlst software incorporates components of the PubMLST database which must be cited in any publications that use mlst as follows:
"This publication made use of the PubMLST website (https://pubmlst.org/) developed by Keith Jolley (Jolley & Maiden 2010, BMC Bioinformatics, 11:595) and sited at the University of Oxford. The development of that website was funded by the Wellcome Trust".
You should also cite this software (currently unpublished) as:
- Seemann T, mlst Github https://github.com/tseemann/mlst