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Supported Applications

MICA

  • Description

    (Metagenomic Inquiry Compressive Acceleration) a family of programs for performing compressively-accelerated metagenomic sequence searches based on BLASTX and DIAMOND.

  • Usage

    To list all executables provided by MICA, run: $ biogrids-list mica Copy to clipboard

  • Usage Notes

    Code is available on Github and locally. For installation and usage instructions please refer to the README.md file in the Github repository. The NCBI NR database for June 20, 2015 is available here

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install mica Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    N. M. Daniels, A. Gallant, J. Peng, L. J. Cowen, M. Baym, and B. Berger. 2013. Compressive Genomics for Protein Databases. Bioinformatics. 29(13): i283-i290.


    • *Full citation information available through

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