Supported Applications
Mash
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Description
is a fast sequence distance estimator that uses the MinHash algorithm and is designed to work with genomes and metagenomes in the form of assemblies or reads.
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install mashAvailable operating systems: Linux 64, OS X INTEL -
Primary Citation*
B. D. Ondov, T. J. Treangen, P. Melsted, A. B. Mallonee, N. H. Bergman, S. Koren, and A. M. Phillippy. 2016. Mash: fast genome and metagenome distance estimation using MinHash. Genome Biol.. 17(1): 132.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64: 2.2 (1.8 MB)
OS X INTEL: 2.2 (900.9 KB) -
Other Versions
Linux 64:
2.1 (1.5 MB) -
OS X INTEL:
2.1 (883.5 KB)