Supported Applications

maq

Description

(Mapping and Assembly with Qualities) builds mapping assemblies from short reads generated by the next-generation sequencing machines.
Usage
To list all executables provided by maq, run: $ biogrids-list maq
Installation
Use the following command to install this title with the CLI client: $ biogrids-cli install maq Available operating systems: Linux 64
Primary Citation*

H. Li, J. Ruan, and R. Durbin. 2008. Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Research. Cold Spring Harbor Laboratory Press. 18(11): 1851-1858.
- *Full citation information available through

Keywords

ChIP-Sequencing, High-throughput sequencing, Read Alignment, WGS Analysis
Default Versions

Linux 64: 0.7.1 (1.1 MB)
Developers

Richard Durbin, Heng Li