Supported Applications

MAPS

Description

MAPS (Model-based Analysis of PLAC-Seq data) pipeline is a a set of multiple scripts used to analyze PLAC-Seq and HiChIP data.
Usage
To list all executables provided by MAPS, run: $ biogrids-list maps
Usage Notes

Also includes Arima_Genomics pipeline.
Installation
Use the following command to install this title with the CLI client: $ biogrids-cli install maps Available operating systems: Linux 64
Primary Citation*

I. Juric, M. Yu, A. Abnousi, R. Raviram, R. Fang, Y. Zhao, Y. Zhang, Y. Qiu, Y. Yang, Y. Li, B. Ren, and M. Hu. 2019. Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments. PLoS Comput Biol. 15(4): e1006982.
- *Full citation information available through