Button for mobile navigation

Supported Applications


  • Description

    MAPS (Model-based Analysis of PLAC-Seq data) pipeline is a a set of multiple scripts used to analyze PLAC-Seq and HiChIP data.

  • Usage

    To list all executables provided by MAPS, run: $ biogrids-list maps Copy to clipboard
  • Usage Notes

    Also includes Arima_Genomics pipeline.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install maps Copy to clipboard Available operating systems: Linux 64
  • Primary Citation*

    I. Juric, M. Yu, A. Abnousi, R. Raviram, R. Fang, Y. Zhao, Y. Zhang, Y. Qiu, Y. Yang, Y. Li, B. Ren, and M. Hu. 2019. Model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments. PLoS Comput Biol. 15(4): e1006982.

    • *Full citation information available through

  • Keywords

    HiChIP, PLAC-seq

  • Default Versions

    Linux 64:  03052021 (2.3 GB)