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Supported Applications


  • Description

    is a software application used to segment structures in 3D medical images.

  • Usage

    To list all executables provided by ITK-SNAP, run: $ biogrids-list itksnap Copy to clipboard
  • Usage Notes

    Call from Linux command line with itksnap and itksnap-wt. Open OSX app from command line with itksnap.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install itksnap Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Primary Citation*

    P. A. Yushkevich, J. Piven, H. C. Hazlett, R. G. Smith, S. Ho, J. C. Gee, and G. G.. 2006. User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability. Neuroimage. 31(3): 1116-1128.

    • *Full citation information available through