Supported Applications

HMMER

  • Description

    is used for searching sequence databases for sequence homologs, and for making sequence alignments. It implements methods using probabilistic models called profile hidden Markov models (profile HMMs).

  • Primary Citation*

    E. SR.. 2011. Accelerated Profile HMM Searches. PLoS Comput Biol.. 7(10): e1002195.


    • *Full citation information available through

  • Default Versions

    Linux 64:  3.2.1
    OS X INTEL:  3.2.1

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