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HipSTR

  • Description

    (Haplotype inference and phasing for Short Tandem Repeats) a novel haplotype-based method for robustly genotyping and phasing STRs from Illumina sequencing data. HipSTR was specifically developed to deal with short tandem repeats (STRs) in genomic sequences in the hopes of obtaining more robust STR genotypes.

  • Usage

    To list all executables provided by HipSTR, run: $ biogrids-list hipstr Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install hipstr Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    T. Willems, D. Zielinski, J. Yuan, A. Gordon, and M. G. &. Y. Erlich. 2017. Genome-wide profiling of heritable and de novo STR variations. Nature Methods. 14(6): 590-592.


    • *Full citation information available through

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