Supported Applications


  • Description

    A tool for mapping and performing quality control on Hi-C data

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install hicup Copy to clipboard
  • Primary Citation*

    S. Wingett, P. Ewels, M. Furlan-Magaril, T. Nagano, S. Schoenfelder, P. Fraser, and S. Andrews. 2015. HiCUP: pipeline for mapping and processing Hi-C data. F1000Research. 4: 1310.

    • *Full citation information available through

  • Default Versions

    Linux 64:  0.8.2
    OS X INTEL:  0.8.2