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GSearch

  • Description

    is an ultra-fast and scalable microbial genome search program based on MinHash-like metric and graph-based approximate nearest neighbor search

  • Usage

    To list all executables provided by GSearch, run: $ biogrids-list gsearch Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install gsearch Copy to clipboard Available operating systems: Linux 64

  • Citation Note

    Please cite:


    Jianshu Zhao, Jean Pierre Both, Luis M. Rodriguez-R and Konstantinos T. Konstantinidis, 2022. GSearch: Ultra-Fast and Scalable Microbial Genome Search by combining Kmer Hashing with Hierarchical Navigable Small World Graphs. bioRxiv 2022:2022.2010.2021.513218. biorxiv.


  • Keywords

    Genomics

  • Default Versions

    Linux 64:  0.1.2 (45.5 MB)

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