(GNU-based Virus IDentification) a Python3 program for Gene Novelty Unit-based Virus Identification for SARS-CoV-2. It ranks CDS nucleotide sequences in a genome fna file based on the number of observed exact CDS nucleotide matches in a public or private database. It was created to type SARS-CoV-2 genomes using a whole genome multilocus sequence typing (wgMLST) approach.
InstallationUse the following command to install this title with the CLI client:
$ biogrids-cli install gnuvidAvailable operating systems: Linux 64, OS X INTEL
Citation NotePlease cite the website: https://github.com/ahmedmagds/GNUVID
Linux 64:  2.2 (693.6 MB)
OS X INTEL:  2.2 (664.8 MB)