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FusionCatcher

  • Description

    finds somatic fusion-genes in RNA-seq data.

  • Usage

    To list all executables provided by FusionCatcher, run: $ biogrids-list fusioncatcher Copy to clipboard

  • Usage Notes

    FusionCatcher as installed in BioGrids provides the following commands:

    fusioncatcher

    fusioncatcher-batch

    fusioncatcher-batch.py

    fusioncatcher-build

    fusioncatcher-build.py

    fusioncatcher.py

    download-human-db.sh

    The download-human-db.sh script will not install databases into the BioGrids directory. These must be installed elsewhere.

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install fusioncatcher Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Citation Note

    Please cite the website:

    https://github.com/ndaniel/fusioncatcher

  • Keywords

    Genomics

  • Default Versions

    Linux 64:  1.33 (993.2 MB)
    OS X INTEL:  1.33 (797.5 MB)

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