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freebayes

  • Description

    Bayesian haplotype-based polymorphism discovery and genotyping.

  • Usage

    To list all executables provided by freebayes, run: $ biogrids-list freebayes Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install freebayes Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Citation Note

    A preprint Haplotype-based variant detection from short-read sequencing provides an overview of the statistical models used in freebayes. We ask that you cite this paper if you use freebayes in work that leads to publication. This preprint is used for documentation and citation. freebayes was never submitted for review, but has been used in over 1000 publications.


    Please use this citation format:

    Garrison E, Marth G. Haplotype-based variant detection from short-read sequencing. arXiv preprint arXiv:1207.3907 [q-bio.GN] 2012


    If possible, please also refer to the version number provided by freebayes when it is run without arguments or with the --help option.


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