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  • Description

    a quality control tool for high throughput sequence data.

  • Usage

    To list all executables provided by FastQC, run: $ biogrids-list fastqc Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install fastqc Copy to clipboard Available operating systems: Linux 64, OS X INTEL
  • Citation Note

    Users of the program should cite the url http://www.bioinformatics.bbsrc.ac.uk/projects/fastqc
  • Webinars

    Using FastQC to check the quality of high throughput sequence

    FastQC is an application which reads raw sequence data from high throughput sequencers and runs a set of quality checks to produce a report which allows you to quickly assess the overall quality of your run, and to spot any potential problems or biases.

    This video demonstrates the use of FastQC to analyse some sequence data and goes through the results to explain what a good dataset looks like, and what sort of problems you might encounter.