Supported Applications
eXpress
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Description
a streaming tool for quantifying the abundances of a set of target sequences from sampled subsequences.
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install expressAvailable operating systems: Linux 64 -
Primary Citation*
A. Roberts and L. Pachter. 2015. Streaming fragment assignment for real-time analysis of sequencing experiments. Nature Methods. Nature. 10: 71-73.
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*Full citation information available through
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Keywords
High-throughput sequencing, RNA-Sequencing, Transcript Quantification
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Default Versions
Linux 64: 1.5.1 (10.5 MB)
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Developers
Adam Roberts, Lior Pachter, Xprs Ask