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EPA-ng

  • Description

    a complete rewrite of the Evolutionary Placement Algorithm (EPA), previously implemented in RAxML. It uses libpll and pll-modules to perform maximum likelihood-based phylogenetic placement of genetic sequences on a user-supplied reference tree and alignment.

  • Usage

    To list all executables provided by EPA-ng, run: $ biogrids-list epa-ng Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install epa-ng Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    P. Barbera, A. M. Kozlov, L. Czech, B. Morel, D. Darriba, T. Flouri, and A. Stamatakis. 2019. EPA-ng: Massively Parallel Evolutionary Placement of Genetic Sequences. Systematic biology. 68(2): 365-369.


    • *Full citation information available through

  • Keywords

    Phylogenomics

  • Default Versions

    Linux 64:  0.3.8 (21.6 MB)
    OS X INTEL:  0.3.8 (7.9 MB)

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