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elPrep

  • Description

    a high-performance tool for analyzing .sam/.bam files (up to and including variant calling) in sequencing pipelines.

  • Usage

    To list all executables provided by elPrep, run: $ biogrids-list elprep Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install elprep Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    C. Herzeel, P. Costanza, D. Decap, J. Fostier, R. Wuyts, and W. Verachtert. 2021. Multithreaded variant calling in elPrep 5. PLoS One. 16(2): e0244471.


    • *Full citation information available through

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