Supported Applications

dRep

Description

a python program for rapidly comparing large numbers of genomes, dRep can also "de-replicate" a genome set by identifying groups of highly similar genomes and choosing the best representative genome for each genome set.
Usage
To list all executables provided by dRep, run: $ biogrids-list drep
Installation
Use the following command to install this title with the CLI client: $ biogrids-cli install drep Available operating systems: Linux 64, OS X INTEL
Primary Citation*

M. R. Olm, C. T. Brown, B. Brooks, and J. F. Banfield. 2017. dRep: a tool for fast and accurate genomic comparisons that enables improved genome recovery from metagenomes through de-replication. ISME J.. 11(12): 2864-2868.
- *Full citation information available through

Keywords

High-throughput sequencing, Metagenomic Sequencing Analysis
Default Versions

Linux 64: 3.4.4 (590.8 MB)
OS X INTEL: 3.4.4 (551.0 MB)
Other Versions
- OS X INTEL:
  3.1.1 (683.6 MB)