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DIAMOND

  • Description

    a high-throughput program for aligning a file of short DNA sequencing reads against a protein reference database such as NR, at 20,000 times the speed of BLASTX, with high sensitivity.

  • Usage

    To list all executables provided by DIAMOND, run: $ biogrids-list diamond Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ biogrids-cli install diamond Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    B. Buchfink, C. Xie, and D. H. Huson. 2015. Fast and sensitive protein alignment using DIAMOND. Nature Methods. Nature. 12: 59-60.


    • *Full citation information available through

  • Keywords

    High-throughput sequencing, Metagenomic Sequencing Analysis, Protein Database Search

  • Default Versions

    Linux 64:  2.1.11 (27.5 MB)
    OS X INTEL:  2.1.11 (12.8 MB)

  • Other Versions

      Linux 64:

      0.7.11 (3.9 MB) , 0.7.12 (3.9 MB) , 0.7.9 (3.9 MB) , 0.8.36 (3.5 MB) , 0.9.26 (6.9 MB) , 2.0.4 (62.8 MB) , 2.1.4 (21.7 MB) , 2.1.6 (21.3 MB) , 2.1.8 (55.8 MB) , 2.1.9 (58.0 MB)

    • OS X INTEL:

      0.8.36 (732.0 KB) , 0.9.26 (6.3 MB) , 2.0.4 (3.2 MB) , 2.1.4 (10.0 MB) , 2.1.6 (9.8 MB) , 2.1.8 (35.3 MB) , 2.1.9 (36.2 MB)

  • Developers

    Benjamin Buchfink

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