Supported Applications
DIAMOND
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Description
a high-throughput program for aligning a file of short DNA sequencing reads against a protein reference database such as NR, at 20,000 times the speed of BLASTX, with high sensitivity.
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install diamondAvailable operating systems: Linux 64, OS X INTEL -
Primary Citation*
B. Buchfink, C. Xie, and D. H. Huson. 2015. Fast and sensitive protein alignment using DIAMOND. Nature Methods. Nature. 12: 59-60.
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*Full citation information available through
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Keywords
High-throughput sequencing, Metagenomic Sequencing Analysis, Protein Database Search
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Default Versions
Linux 64: 2.1.4 (21.7 MB)
OS X INTEL: 2.1.4 (10.0 MB) -
Other Versions
Linux 64:
0.7.11 (3.9 MB) , 0.7.12 (3.9 MB) , 0.7.9 (3.9 MB) , 0.8.36 (3.5 MB) , 0.9.26 (6.9 MB) , 2.0.4 (62.8 MB) -
OS X INTEL:
0.8.36 (731.8 KB) , 0.9.26 (6.3 MB) , 2.0.4 (3.2 MB)
Developers
Benjamin Buchfink