Supported Applications
Delly
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Description
Delly is an integrated structural variant (SV) prediction method that can discover, genotype and visualize deletions, tandem duplications, inversions and translocations at single-nucleotide resolution in short-read massively parallel sequencing data. It uses paired-ends, split-reads and read-depth to sensitively and accurately delineate genomic rearrangements throughout the genome. Structural variants can be visualized using Delly-maze and Delly-suave.
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Installation
Use the following command to install this title with the CLI client:$ biogrids-cli install delly
Available operating systems: Linux 64, OS X INTEL -
Primary Citation*
T. Rausch, T. Zichner, A. Schlattl, A. M. Stütz, V. Benes, and J. O. Korbel. 2012. DELLY: structural variant discovery by integrated paired-end and split-read analysis. Bioinformatics. 28(18): i333-i339.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  0.8.1 (63.2 MB)
OS X INTEL:  0.8.1 (43.9 MB)